Coverart for item
The Resource Algorithms in bioinformatics : 12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings, Ben Raphael, Jijun Tang (eds.), (electronic book)

Algorithms in bioinformatics : 12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings, Ben Raphael, Jijun Tang (eds.), (electronic book)

Label
Algorithms in bioinformatics : 12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings
Title
Algorithms in bioinformatics
Title remainder
12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings
Statement of responsibility
Ben Raphael, Jijun Tang (eds.)
Title variation
WABI 2012
Creator
Contributor
Subject
Genre
Language
eng
Member of
Cataloging source
GW5XE
Dewey number
005.1
Index
index present
LC call number
QA76.9.A43
LC item number
W33 2012
Literary form
non fiction
http://bibfra.me/vocab/lite/meetingDate
2012
http://bibfra.me/vocab/lite/meetingName
WABI 2012
Nature of contents
  • dictionaries
  • bibliography
http://library.link/vocab/relatedWorkOrContributorDate
1974-
http://library.link/vocab/relatedWorkOrContributorName
  • Raphael, Benjamin J.
  • Tang, Jijun
Series statement
  • Lecture notes in bioinformatics
  • Lecture notes in computer science,
  • LNCS sublibrary. SL 8, Bioinformatics
Series volume
7534
http://library.link/vocab/subjectName
  • Computer algorithms
  • Bioinformatics
Label
Algorithms in bioinformatics : 12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings, Ben Raphael, Jijun Tang (eds.), (electronic book)
Instantiates
Publication
Note
International conference proceedings
Antecedent source
unknown
Bibliography note
Includes bibliographical references and author index
Color
multicolored
Contents
  • Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Models
  • Yun Zhu and Luay Nakhleh
  • Estimating Population Size via Line Graph Reconstruction
  • Bjarni V. Halldórsson, Dima Blokh and Roded Sharan
  • Extracting Conflict-Free Information from Multi-labeled Trees
  • Akshay Deepak, David Fernández-Baca and Michelle M. McMahon
  • Reducing Problems in Unrooted Tree Compatibility to Restricted Triangulations of Intersection Graphs
  • Rob Gysel, Kristian Stevens and Dan Gusfield
  • An Optimal Reconciliation Algorithm for Gene Trees with Polytomies
  • Manuel Lafond, Krister M. Swenson and Nadia El-Mabrouk --
  • Preserving Inversion Phylogeny Reconstruction
  • Matthias Bernt, Kun-Mao Chao, Jyun-Wei Kao, Martin Middendorf and Eric Tannier
  • Fast Phylogenetic Tree Reconstruction Using Locality-Sensitive Hashing
  • Daniel G. Brown and Jakub Truszkowski
  • Efficient Computation of Popular Phylogenetic Tree Measures
  • Constantinos Tsirogiannis, Brody Sandel and Dimitris Cheliotis
  • SibJoin: A Fast Heuristic for Half-Sibling Reconstruction
  • Daniel G. Brown and Daniel Dexter
  • Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik and Sanghamitra Bandyopadhyay, et al.
  • CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population
  • Yen-Yi Lin, Phuong Dao, Faraz Hach, Marzieh Bakhshi and Fan Mo, et al.
  • Improved Lower Bounds on the Compatibility of Quartets, Triplets, and Multi-state Characters
  • Brad Shutters, Sudheer Vakati and David Fernández-Baca
  • Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches
  • Yasuo Tabei --
  • Accounting for Gene Tree Uncertainties Improves Gene Trees and Reconciliation Inference
  • Thi Hau Nguyen, Jean-Philippe Doyon, Stéphanie Pointet, Anne-Muriel Arigon Chifolleau and Vincent Ranwez, et al.
  • RNA Tree Comparisons via Unrooted Unordered Alignments
  • Nimrod Milo, Shay Zakov, Erez Katzenelson, Eitan Bachmat and Yefim Dinitz, et al.
  • Tree Decomposition and Parameterized Algorithms for RNA Structure-Sequence Alignment Including Tertiary Interactions and Pseudoknots
  • (Extended Abstract)
  • Philippe Rinaudo, Yann Ponty, Dominique Barth and Alain Denise
  • [delta]-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data
  • MORPH-PRO: A Novel Algorithm and Web Server for Protein Morphing
  • Natalie E. Castellana, Andrey Lushnikov, Piotr Rotkiewicz, Natasha Sefcovic and Pavel A. Pevzner, et al.
  • How Accurately Can We Model Protein Structures with Dihedral Angles?
  • Xuefeng Cui, Shuai Cheng Li, Dongbo Bu, Babak Alipanahi Ramandi and Ming Li
  • Resolving Spatial Inconsistencies in Chromosome Conformation Data
  • Geet Duggal, Rob Patro, Emre Sefer, Hao Wang and Darya Filippova, et al.
  • MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides
  • Hosein Mohimani, Sangtae Kim and Pavel A. Pevzner --
  • Comparing DNA Sequence Collections by Direct Comparison of Compressed Text Indexes
  • Anthony J. Cox, Tobias Jakobi, Giovanna Rosone and Ole B. Schulz-Trieglaff
  • Succinct de Bruijn Graphs
  • Alexander Bowe, Taku Onodera, Kunihiko Sadakane and Tetsuo Shibuya
  • Space-Efficient and Exact de Bruijn Graph Representation Based on a Bloom Filter
  • Rayan Chikhi and Guillaume Rizk
  • From de Bruijn Graphs to Rectangle Graphs for Genome Assembly
  • Nikolay Vyahhi, Alex Pyshkin, Son Pham and Pavel A. Pevzner
  • A Simplified View of DCJ-Indel Distance
  • Phillip E. C. Compeau
  • DCJ-indel Distance with Distinct Operation Costs
  • Poly H. da Silva, Marília D. V. Braga, Raphael Machado and Simone Dantas
  • Hidden Breakpoints in Genome Alignments
  • Birte Kehr, Knut Reinert and Aaron E. Darling
  • A Probabilistic Approach to Accurate Abundance-Based Binning of Metagenomic Reads
  • Olga Tanaseichuk, James Borneman and Tao Jiang
  • Tandem Halving Problems by DCJ
  • Antoine Thomas, Aïda Ouangraoua and Jean-Stéphane Varré
  • FinIS: Improved in silico Finishing Using an Exact Quadratic Programming Formulation
  • A Practical Approximation Algorithm for Solving Massive Instances of Hybridization Number
  • Leo van Iersel, Steven Kelk, Nela Lekić and Celine Scornavacca
  • Distributed String Mining for High-Throughput Sequencing Data
  • Niko Välimäki and Simon J. Puglisi
  • Song Gao, Denis Bertrand and Niranjan Nagarajan
  • Lightweight LCP Construction for Next-Generation Sequencing Datasets
  • Markus J. Bauer, Anthony J. Cox, Giovanna Rosone and Marinella Sciortino
  • Sign Assignment Problems on Protein Networks
  • Shay Houri and Roded Sharan
  • Sparse Learning Based Linear Coherent Bi-clustering
  • Yi Shi, Xiaoping Liao, Xinhua Zhang, Guohui Lin and Dale Schuurmans
Control code
SPR809548292
Dimensions
unknown
Extent
1 online resource.
File format
unknown
Form of item
online
Isbn
9783642331220
Level of compression
unknown
Quality assurance targets
not applicable
Reformatting quality
unknown
Reproduction note
Electronic resource.
Sound
unknown sound
Specific material designation
remote
Label
Algorithms in bioinformatics : 12th International Workshop, WABI 2012, Ljubljana, Slovenia, September 10-12, 2012. Proceedings, Ben Raphael, Jijun Tang (eds.), (electronic book)
Publication
Note
International conference proceedings
Antecedent source
unknown
Bibliography note
Includes bibliographical references and author index
Color
multicolored
Contents
  • Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Models
  • Yun Zhu and Luay Nakhleh
  • Estimating Population Size via Line Graph Reconstruction
  • Bjarni V. Halldórsson, Dima Blokh and Roded Sharan
  • Extracting Conflict-Free Information from Multi-labeled Trees
  • Akshay Deepak, David Fernández-Baca and Michelle M. McMahon
  • Reducing Problems in Unrooted Tree Compatibility to Restricted Triangulations of Intersection Graphs
  • Rob Gysel, Kristian Stevens and Dan Gusfield
  • An Optimal Reconciliation Algorithm for Gene Trees with Polytomies
  • Manuel Lafond, Krister M. Swenson and Nadia El-Mabrouk --
  • Preserving Inversion Phylogeny Reconstruction
  • Matthias Bernt, Kun-Mao Chao, Jyun-Wei Kao, Martin Middendorf and Eric Tannier
  • Fast Phylogenetic Tree Reconstruction Using Locality-Sensitive Hashing
  • Daniel G. Brown and Jakub Truszkowski
  • Efficient Computation of Popular Phylogenetic Tree Measures
  • Constantinos Tsirogiannis, Brody Sandel and Dimitris Cheliotis
  • SibJoin: A Fast Heuristic for Half-Sibling Reconstruction
  • Daniel G. Brown and Daniel Dexter
  • Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik and Sanghamitra Bandyopadhyay, et al.
  • CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population
  • Yen-Yi Lin, Phuong Dao, Faraz Hach, Marzieh Bakhshi and Fan Mo, et al.
  • Improved Lower Bounds on the Compatibility of Quartets, Triplets, and Multi-state Characters
  • Brad Shutters, Sudheer Vakati and David Fernández-Baca
  • Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches
  • Yasuo Tabei --
  • Accounting for Gene Tree Uncertainties Improves Gene Trees and Reconciliation Inference
  • Thi Hau Nguyen, Jean-Philippe Doyon, Stéphanie Pointet, Anne-Muriel Arigon Chifolleau and Vincent Ranwez, et al.
  • RNA Tree Comparisons via Unrooted Unordered Alignments
  • Nimrod Milo, Shay Zakov, Erez Katzenelson, Eitan Bachmat and Yefim Dinitz, et al.
  • Tree Decomposition and Parameterized Algorithms for RNA Structure-Sequence Alignment Including Tertiary Interactions and Pseudoknots
  • (Extended Abstract)
  • Philippe Rinaudo, Yann Ponty, Dominique Barth and Alain Denise
  • [delta]-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data
  • MORPH-PRO: A Novel Algorithm and Web Server for Protein Morphing
  • Natalie E. Castellana, Andrey Lushnikov, Piotr Rotkiewicz, Natasha Sefcovic and Pavel A. Pevzner, et al.
  • How Accurately Can We Model Protein Structures with Dihedral Angles?
  • Xuefeng Cui, Shuai Cheng Li, Dongbo Bu, Babak Alipanahi Ramandi and Ming Li
  • Resolving Spatial Inconsistencies in Chromosome Conformation Data
  • Geet Duggal, Rob Patro, Emre Sefer, Hao Wang and Darya Filippova, et al.
  • MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides
  • Hosein Mohimani, Sangtae Kim and Pavel A. Pevzner --
  • Comparing DNA Sequence Collections by Direct Comparison of Compressed Text Indexes
  • Anthony J. Cox, Tobias Jakobi, Giovanna Rosone and Ole B. Schulz-Trieglaff
  • Succinct de Bruijn Graphs
  • Alexander Bowe, Taku Onodera, Kunihiko Sadakane and Tetsuo Shibuya
  • Space-Efficient and Exact de Bruijn Graph Representation Based on a Bloom Filter
  • Rayan Chikhi and Guillaume Rizk
  • From de Bruijn Graphs to Rectangle Graphs for Genome Assembly
  • Nikolay Vyahhi, Alex Pyshkin, Son Pham and Pavel A. Pevzner
  • A Simplified View of DCJ-Indel Distance
  • Phillip E. C. Compeau
  • DCJ-indel Distance with Distinct Operation Costs
  • Poly H. da Silva, Marília D. V. Braga, Raphael Machado and Simone Dantas
  • Hidden Breakpoints in Genome Alignments
  • Birte Kehr, Knut Reinert and Aaron E. Darling
  • A Probabilistic Approach to Accurate Abundance-Based Binning of Metagenomic Reads
  • Olga Tanaseichuk, James Borneman and Tao Jiang
  • Tandem Halving Problems by DCJ
  • Antoine Thomas, Aïda Ouangraoua and Jean-Stéphane Varré
  • FinIS: Improved in silico Finishing Using an Exact Quadratic Programming Formulation
  • A Practical Approximation Algorithm for Solving Massive Instances of Hybridization Number
  • Leo van Iersel, Steven Kelk, Nela Lekić and Celine Scornavacca
  • Distributed String Mining for High-Throughput Sequencing Data
  • Niko Välimäki and Simon J. Puglisi
  • Song Gao, Denis Bertrand and Niranjan Nagarajan
  • Lightweight LCP Construction for Next-Generation Sequencing Datasets
  • Markus J. Bauer, Anthony J. Cox, Giovanna Rosone and Marinella Sciortino
  • Sign Assignment Problems on Protein Networks
  • Shay Houri and Roded Sharan
  • Sparse Learning Based Linear Coherent Bi-clustering
  • Yi Shi, Xiaoping Liao, Xinhua Zhang, Guohui Lin and Dale Schuurmans
Control code
SPR809548292
Dimensions
unknown
Extent
1 online resource.
File format
unknown
Form of item
online
Isbn
9783642331220
Level of compression
unknown
Quality assurance targets
not applicable
Reformatting quality
unknown
Reproduction note
Electronic resource.
Sound
unknown sound
Specific material designation
remote

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