Coverart for item
The Resource Protein bioinformatics : from protein modifications and networks to proteomics, edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross

Protein bioinformatics : from protein modifications and networks to proteomics, edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross

Label
Protein bioinformatics : from protein modifications and networks to proteomics
Title
Protein bioinformatics
Title remainder
from protein modifications and networks to proteomics
Statement of responsibility
edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross
Contributor
Editor
Subject
Genre
Language
eng
Member of
Cataloging source
RML
Dewey number
572/.6
Illustrations
illustrations
Index
index present
LC call number
QP551
Literary form
non fiction
Nature of contents
  • dictionaries
  • bibliography
http://library.link/vocab/relatedWorkOrContributorName
  • Wu, Cathy H.
  • Arighi, Cecilia N.
  • Ross, Karen E.
Series statement
  • Springer protocols
  • Methods in molecular biology,
Series volume
1558
http://library.link/vocab/subjectName
  • Proteomics
  • Bioinformatics
  • Proteins
  • Proteins
  • Protein Interaction Mapping
  • Computational Biology
  • Databases, Factual
  • Mass Spectrometry
  • Proteome
Label
Protein bioinformatics : from protein modifications and networks to proteomics, edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross
Instantiates
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
mixed
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Structure-based virtual screening
  • Qingliang Li and Salim Shah
  • Bioinformatics analysis of protein phosphorylation in plant systems biology using P3DB
  • Qiuming Yao and Dong Xu
  • Navigating the glycome space and connecting the glycoproteome
  • Matthew P. Campbell, Robyn A. Peterson, Elisabeth Gasteiger, Julien Mariethoz, Frederique Lisacek, and Nicolle H. Packer
  • Impact of nonsynonymous single-nucleotide variations on post-translational modification sites in human proteins
  • Naila Gulzar, Hayley Dingerdissen, Cheng Yan, and Raja Mazumder
  • Analysis of cysteine redox post-translational modifications in cell biology and drug pharmacology
  • Revati Wani and Brion W. Murray
  • Protein bioinformatics databases and resources
  • Analysis of protein phosphorylation and its functional impact on protein-protein interactions via text mining of the scientific literature
  • Qinghua Wang, Karen E. Ross, Hongzhan Huang, Jia Ren, Gang Li, K. Vijay-Shanker, Cathy H. Wu, and Cecilia N. Arighi
  • Functional interaction network construction and analysis for disease discovery
  • Guanming Wu and Robin Haw
  • Prediction of protein interactions by structural matching : prediction of PPI networks and the effects of mutations on PPIs that combines sequence and structural information
  • Nurcan Tuncbag, Ozlem Keskin, Ruth Nussinov, and Attila Gursoy
  • NDEx : a community resource for sharing and publishing of biological networks
  • Rudolf T. Pillich, Jing Chen, Vladimir Rynkov, David Welker, and Dexter Pratt
  • Bioinformatics analysis of functional associations of PTMs
  • Pablo Minguez and Peer Bork
  • Chuming Chen, Hongzhan Huang, and Cathy H. Wu
  • Bioinformatics analysis of PTM-modified protein interaction networks and complexes
  • Jonathan Woodsmith, Ulrich Stelzl, and Arunachalam Vinayagam
  • iPTMnet : integrative bioinformatics for studying PTM networks
  • Karen E. Ross, Hongzhan Huang, Jia Ren, Cecilia N. Arighi, Gang Li, Catalina O. Tudor, Mengxi Lv, Jung-Youn Lee, Sheng-Chih Chen, K. Vijay-Shanker, and Cathy H. Wu
  • Protein identification from tandem mass spectra by database searching
  • Nathan J. Edwards
  • Bioinformatics analysis of top-down mass spectrometry data with ProSight Lite
  • Caroline J. DeHart, Ryan T. Fellers, Luca Fornelli, Neil L. Kelleher, and Paul M. Thomas
  • Mapping biological networks from quantitative data-independent acquisition mass spectrometry : data to knowledge pipelines
  • Erin L. Crowgey, Andrea Matlock, Vidya Venkatraman, Justyna Fert-Bober, and Jennifer E. Van Eyk
  • UniProt protein knowledgebase
  • Annotation of alternatively spliced proteins and transcripts with protein-folding algorithms and isoform-level functional networks
  • Hongdong Li, Yang Zhang, Yuanfang Guan, Rajasree Menon, and Gilbert S. Omenn
  • Computational and statistical methods for high-throughput mass spectrometry-based PTM analysis
  • Veit Schwämmle and Marc Vaudel
  • Cross-species PTM mapping from phosphoproteomic data
  • Rima Chaudhuri and Jean Yee Hwa Yang
  • Sangya Pundir, Maria J. Martin, and Claire O'Donovan
  • Tutorial on protein ontology resources
  • Cecilia N. Arighi, Harold Drabkin, Karen R. Christie, Karen E. Ross, and Darren A. Natale
  • CATH-Gene3D : generation of the resource and its use in obtaining structural and functional annotations for protein sequences
  • Natalie L. Dawson, Ian Sillitoe, Jonathan G. Lees, Su Datt Lam, and Christine A. Orengo
Dimensions
unknown
Extent
1 online resource (xiv, 472 pages)
Form of item
online
Isbn
9781493967834
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
illustrations (chiefly color).
Sound
unknown sound
Specific material designation
remote
System control number
ocn971495364
Label
Protein bioinformatics : from protein modifications and networks to proteomics, edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
mixed
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Structure-based virtual screening
  • Qingliang Li and Salim Shah
  • Bioinformatics analysis of protein phosphorylation in plant systems biology using P3DB
  • Qiuming Yao and Dong Xu
  • Navigating the glycome space and connecting the glycoproteome
  • Matthew P. Campbell, Robyn A. Peterson, Elisabeth Gasteiger, Julien Mariethoz, Frederique Lisacek, and Nicolle H. Packer
  • Impact of nonsynonymous single-nucleotide variations on post-translational modification sites in human proteins
  • Naila Gulzar, Hayley Dingerdissen, Cheng Yan, and Raja Mazumder
  • Analysis of cysteine redox post-translational modifications in cell biology and drug pharmacology
  • Revati Wani and Brion W. Murray
  • Protein bioinformatics databases and resources
  • Analysis of protein phosphorylation and its functional impact on protein-protein interactions via text mining of the scientific literature
  • Qinghua Wang, Karen E. Ross, Hongzhan Huang, Jia Ren, Gang Li, K. Vijay-Shanker, Cathy H. Wu, and Cecilia N. Arighi
  • Functional interaction network construction and analysis for disease discovery
  • Guanming Wu and Robin Haw
  • Prediction of protein interactions by structural matching : prediction of PPI networks and the effects of mutations on PPIs that combines sequence and structural information
  • Nurcan Tuncbag, Ozlem Keskin, Ruth Nussinov, and Attila Gursoy
  • NDEx : a community resource for sharing and publishing of biological networks
  • Rudolf T. Pillich, Jing Chen, Vladimir Rynkov, David Welker, and Dexter Pratt
  • Bioinformatics analysis of functional associations of PTMs
  • Pablo Minguez and Peer Bork
  • Chuming Chen, Hongzhan Huang, and Cathy H. Wu
  • Bioinformatics analysis of PTM-modified protein interaction networks and complexes
  • Jonathan Woodsmith, Ulrich Stelzl, and Arunachalam Vinayagam
  • iPTMnet : integrative bioinformatics for studying PTM networks
  • Karen E. Ross, Hongzhan Huang, Jia Ren, Cecilia N. Arighi, Gang Li, Catalina O. Tudor, Mengxi Lv, Jung-Youn Lee, Sheng-Chih Chen, K. Vijay-Shanker, and Cathy H. Wu
  • Protein identification from tandem mass spectra by database searching
  • Nathan J. Edwards
  • Bioinformatics analysis of top-down mass spectrometry data with ProSight Lite
  • Caroline J. DeHart, Ryan T. Fellers, Luca Fornelli, Neil L. Kelleher, and Paul M. Thomas
  • Mapping biological networks from quantitative data-independent acquisition mass spectrometry : data to knowledge pipelines
  • Erin L. Crowgey, Andrea Matlock, Vidya Venkatraman, Justyna Fert-Bober, and Jennifer E. Van Eyk
  • UniProt protein knowledgebase
  • Annotation of alternatively spliced proteins and transcripts with protein-folding algorithms and isoform-level functional networks
  • Hongdong Li, Yang Zhang, Yuanfang Guan, Rajasree Menon, and Gilbert S. Omenn
  • Computational and statistical methods for high-throughput mass spectrometry-based PTM analysis
  • Veit Schwämmle and Marc Vaudel
  • Cross-species PTM mapping from phosphoproteomic data
  • Rima Chaudhuri and Jean Yee Hwa Yang
  • Sangya Pundir, Maria J. Martin, and Claire O'Donovan
  • Tutorial on protein ontology resources
  • Cecilia N. Arighi, Harold Drabkin, Karen R. Christie, Karen E. Ross, and Darren A. Natale
  • CATH-Gene3D : generation of the resource and its use in obtaining structural and functional annotations for protein sequences
  • Natalie L. Dawson, Ian Sillitoe, Jonathan G. Lees, Su Datt Lam, and Christine A. Orengo
Dimensions
unknown
Extent
1 online resource (xiv, 472 pages)
Form of item
online
Isbn
9781493967834
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
illustrations (chiefly color).
Sound
unknown sound
Specific material designation
remote
System control number
ocn971495364

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